Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015895635.1_cds_XP_016447728.1_42459
CDS Infomation

[gene=LOC107772766] [db_xref=GeneID:107772766] [protein=signal recognition particle 54 kDa protein 1] [protein_id=XP_016447728.1] [location=join(28312..28542,28636..28735,28896..29049,29662..29812,29878..30026,30896..30996,31090..31247,32940..33054,33156..33481)] [gbkey=CDS]
Sequence

ATGGTGTTAGCACAATTAGGGGGGAGCATCTCGCGTGCTCTCCAGCAGATGAGCAATGCC
ACAATCATTGACGAGAAGGTCCTTAACGAATGCCTCAATGAGATCACACGTGCTCTTCTC
CAGTCCGATGTTCAATTTAAACTTGTCCGCGATATGTCCACAAATATAAAAAAAATTGTC
AATCTTGATGATCTTGCCGCTGGACACAACAAGCGTAGGATCATCCAAAAGGCTGTGTTC
GATGAGCTGTGCAAGATATTGGACCCTGGGAAGCCTTCATTTACACCAAAAAAAGGGAAA
CCTAGTGTTGTAATGTTTGTTGGTTTGCAAGGGTCCGGAAAAACTACAACATCTACAAAA
TATGCTTTTTACCACCAGAAAAAAGGTTGGAAGCCAGCTCTAGTGTGTGCAGATACATTC
AGAGCTGGTGCATTCGATCAATTGAAGCAGAATGCAACAAAAGCTAAAATTCCCTTTTAT
GGAAGCTATACAGAATCAGACCCAGTCAAAATAGCTGTGGACGGTGTAGAGACATTTAAG
AAGGAAAATTGTGATCTAATAATTGTGGATACCAGTGGGCGCCACAAACAAGAAGCAGCT
CTTTTTGAAGAGATGCGACAAGTTTCTGAAGCAACGAAACCGGATCTCGTGATATTTGTT
ATGGATAGTAGCATCGGACAAGCTGCTTTTGATCAAGCTCAAGCATTTAGGCAAAGTGTT
GCAGTTGGAGCCGTGATTATTACTAAGATGGATGGCCATGCAAAAGGAGGTGGTGCCCTA
AGTGCAGTTGCTGCAACTAAAAGTCCGATCATATTTATTGGAACTGGTGAACACATGGAC
GAGTTCGAAACTTTTGATGTTAAACCATTTGTCAGCCGTCTTTTAGGCATGGGTGACTTG
TCTGGATTGGTGAACAAGATACAAGACGTGGTCCCAATGGATCAACAGCCTGAGCTTCTT
CAGAAGTTATCAGAAGGACATTTTACCTTCAGGATTATGTACGAGCAATTTCAGAACATG
CTTAAAATGGGTCCTCTTGGCCAGGTGTTTTCAATGCTTCCTGGATTTAGTGCAGAGATG
ATGCCAAAAGGTCGCGAAAAAGAAAGTCAGGCAAAAATTAAGCGGTATATGACGATGATG
GACTCCATGACTAATGAAGAATTGGACAGTACCAACCCAAAGCTTATGACTGAATCTCGA
ATCATGCGTATAGCTAGGGGATCAGGCCGCCTAGTGCATGAGGTGATGGAGATGTTGGAA
GAATACAAACGACTTGCCAAGATATGCAGCAAGATGAAGGGGCTTAAGATTCCAAAGAAG
GGAGAGATGAGTTCCTTGTCCAGAAACATGAATGCACAAAACATGAGCAAAGTTCTTCCC
CCTCAGATGTTGAAACAAATAGGTGGTATGGGTGGTCTACAGAGCTTGATGAAACAAATG
GGTTCCGCGAAGGACATGATGGGTATGTTTGGTGGTGGAGAGTAA

Peptide Sequence

PEP ID

XP_016447728.1
PEP Infomation

PREDICTED: signal recognition particle 54 kDa protein 1 [Nicotiana tabacum]
Sequence

MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMSTNIKKIV
NLDDLAAGHNKRRIIQKAVFDELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTSTK
YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFRQSV
AVGAVIITKMDGHAKGGGALSAVAATKSPIIFIGTGEHMDEFETFDVKPFVSRLLGMGDL
SGLVNKIQDVVPMDQQPELLQKLSEGHFTFRIMYEQFQNMLKMGPLGQVFSMLPGFSAEM
MPKGREKESQAKIKRYMTMMDSMTNEELDSTNPKLMTESRIMRIARGSGRLVHEVMEMLE
EYKRLAKICSKMKGLKIPKKGEMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQSLMKQM
GSAKDMMGMFGGGE

Transcript Sequence

Gene sequence data has not been registered.